Texas A&M Institute for Genome Sciences and Society (TIGSS) has established number of shared resources to support genomics research.
Bioinformatics:
A High Performance Computing Cluster (TIGSS HPCC) has been established in 2012 specifically tailored for Bioinformatics / Computational Biology research. The compute cluster is located in CSC building.
We also provide Bioinformatics consultation and computational analyses of high-throughput data, not limited to Next-generation sequencing data. We follow best practices as specified in many peer reviewed journals and protocol articles. We document every step of the analyses so that you will be able to replicate the analyses if you choose to do so. The following is the simple price structure for data analyses:
- Initial Bioinformatics Consultation / Discussions of Project Design: FREE
- Small assistance / Custom analysis steps / Preliminary analyses ( less than 2 hours): FREE
- Comprehensive data analyses (Internal): $50 / hr
- Comprehensive data analyses (External Academic / Federal): $75 / hr
- Comprehensive data analyses (External Commercial): $100 / hr
Since many tools and open source software produces different outputs in different data formats, please contact us regarding your requirements.
Contact Kranti Konganti for more information.
Experimental Genomics:
Molecular Genomics Lab houses various instruments and lab equipment to support genomics-based research and is located in Reynolds Medical Building 446A. Training and experimental support is available. Please visit the TAMU Core Facilities page for available services.
Contact Andrew Hillhouse for more information about pricing and any other details.
Rodent Preclinical Phenotyping:
The mouse phenotyping equipment houses various instruments to measure and quantitate mouse physiology and behavior. All of the phenotyping equipment is located at the LARR and Reynolds Medical Buildings. Training and experimental support is available. Please visit the iLab TAMU Core Facilities page for available services.
Contact Alexandra Trott for more information and regarding any other details.
Reserve equipment:
Most of the equipment listed below can be reserved through the iLab portal.
To use the facilities managed via the iLab system, you will need to establish an account. For a member of a lab to be able to make requests in iLab, the lab’s PI must already be a registered user.
PIs cannot register for an account using the Login button. To be added to the system, PIs need to send their UIN and Netid username to .
External users who are not eligible for a TAMU Netid can sign up or login using iLab credentials.
After you have an account, login at the CoreFacilities page and view all the services provided.
Cytek Aurora
ProteinThe Cytek Aurora is a prodigy incorporating a unique combination of patent-pending innovative technologies that takes flow cytometry to the

Protein Simple- Jess
ProteinJess automates traditional Western blotting while maximizing multiplexing with multiple detection channels. Automation of protein separation and immunodetection eliminates many

DxC 700 AU
ChemicalThe DxC 700 AU Chemistry Analyzer is the latest innovation in reliable chemistry systems. The DxC 700 AU is used

BioRender
About BioRender A New Way to Render The Texas A&M Institute for Genome Sciences and Society has teamed up with

Poster Board Stands
Start Your Conference Off Right The Texas Institute for Genome Sciences and Society is proud to announce that we are

RPPC Manual & Standard Operating Procedures
Manual & SOPsThe Rodent Preclinical Phenotyping Core (RPPC) offers our users access to all of our general standard operating procedures. The RPPC standard operating procedures provides detailed notes on how to operate all equipment within our suite.

RPPC Prices
Price ListTAMU Price List: For outside institution prices contact Alexandra Trott. Noldus Barnes Maze/ hr $16 Noldus Radial Arm Maze/ hr

Digigait
BehaviorDigigait Analysis System is the most widely applicable and comprehensive gait analysis instrumentation available. It can measure voluntary and treadmill

OsmoPro Multi-Sample Micro-Osmometer
ChemicalThe OsmoPRO features a convenient carousel design that handles up to 20 samples, an intuitive touchscreen interface, and industry-leading performance.

Abaxis VetScan VSPro Chemistry Analyzer
ChemicalThe VETSCAN VSpro is a state-of-the-art specialty analyzer that offers a growing test menu. The PT/aPTT and fibrinogen tests currently offered

Radial Arm Maze
BehaviorThe radial arm maze is a test for spatial, working, and reference learning and memory in mice and allows for

Barnes Maze
BehaviorThe Barnes maze is a well-known paradigm to study spatial learning and memory. This maze consists of a circular table

Leica ASP300 Tissue Processor
HistologyThe Leica ASP300 is designed for routine clinical and research histopathology and is an innovative, smart processor for paraffin infiltration

Rotarod Test for Mice
BehaviorThe Rotarod Test is used to assess motor coordination or fatigue resistance on mice and rats using one unit in

Leica EG1150 Tissue Embedding
HistologyThe Leica EG1150 modular tissue embedding center incorporates two separate components, the Leica EG1150 C cold plate, and the Leica EG1150H

Leica Rotary Microtome 2165
HistologyThe highly versatile LEICA RM 2165 fully motorized rotary microtome is both suitable for routine applications in the medical laboratory and for semi-thin plastic

TubeWriter 360
TubeWriterAny tube, any vial, any size: The TubeWriter 360 prints on anything that will fit under the printhead including the

lncRNApipe
Open Source SoftwarelncRNApipe is a reference annotation based automated pipeline to identify non-coding RNAs, both known and novel from RNA-Seq reads. It

gQTL
Open Source SoftwareMulti-parental recombinant inbred populations, such as the Collaborative Cross (CC) mouse genetic reference population, are increasingly being used for analysis

Maxwell 16 (Promega)
Molecular BiologyThe Maxwell 16 Integrated System combines compact instrumentation, optimized automated methods, prefilled reagent cartridges, service and support to save time,

Qubit Fluorometer (Life Technologies)
Molecular BiologyEasy to use fluorometer for a variety of DNA, RNA and protein assays.

CFX96 Touch™ Real-Time PCR Detection System (Bio-Rad)
Molecular Biology96 well real time PCR system with six-channel detector with quick set up runs. Monitors amplification traces in real time

Tape Station (Agilent)
Molecular BiologyThe Bio-Plex Pro Wash Station eliminates manual wash steps from Bio-Plex Assays, making them as easy as ELISAs. The wash

Bio-Plex Pro Wash Station (Bio-Rad)
Cell BiologyThe Bio-Plex Pro Wash Station eliminates manual wash steps from Bio-Plex Assays, making them as easy as ELISAs. The wash

GentleMACS Octo Dissociator (Miltenyi)
Cell BiologyAutomated tissue processing to dissociate target tissue into single cell suspensions.

MinION (Oxford Nanopore)
SequencingOxford Nanopore DNA sequencer for real time, long-read, and low cost sequencing. Ideal for closing gaps in de novo genome

Cytation 5 (BioTek)
Cell BiologyCell imaging multi-mode microplate reader that combines automated digital microscopy and conventional microplate detection. Includes both high sensitivity filter-based detection

Countess Cell Counter (Life Technologies)
Cell BiologyGenerates automated cell and viability counts in as little as 30sec.

10X Chromium
SequencingChromium Single Cell 3’ performs deep profiling of complex cell populations with high-throughput digital gene expression on a cell-by-cell basis.

EchoMRI-100H
MetabolicEchoMRI-100H for body composition analysis of whole body fat, lean, free water, and total water masses in live animals weighing

Stortz Rodent Endoscope
CancerFor use in small animal endoscopy for various diagnostic, surgical, and orthopedic indications

Heart Monitoring ECGenie
CardiovascularThe Mouse Specifics, Inc.’s ECGenie is a rapid non-invasive solution for recording electrocardiograms (ECGs) in awake mice, rats, and guinea

TSE Phenomaster
MetabolicTSE Phenomaster measures food/water intake, activity monitoring, and calorimetry/O2/CO2 measurements.

Hatteras Diuresis Cages
MetabolicUnique nonwetting polymethylpentene funnel and cone design automatically separates feces and urine for accurate metabolic monitoring without urine wash-over. Exterior

Morris Water Maze
BehaviorThe Water maze is a well-known paradigm to study spatial learning and memory. The maze consists of a large circular

Small Animal Stereotaxic System
BehaviorSmall animal stereotaxic system provides researchers with not only greater ease, but more accurate readings than the vernier scales commonly

Three-chamber Monitoring System
BehaviorThree-chamber sociability monitoring system for behavior analysis.

Shuttle Cages with Shock Floor
BehaviorFully modular Habitest configuration for active and passive Avoidance experiments in rodents. With Habitest, users can create an endless variety

Vevo 3100 Ultrasound
CancerWith a powerful combination of high frame rates and advanced image processing, the Vevo 3100 reduces speckle noise and artifacts

TRU SCAN Activity Monitoring System
BehaviorThe TRU SCAN system is a versatile and simple system to monitor open field activity. Coulbourn’s TRU SCAN arenas feature

Rotarod Test Rats and Mice
BehaviorThe IITC Rotarod Test is used to assess the effect of drugs on the motor coordination or fatigue resistance on

Hatteras Mouse Multi Channel Blood Pressure Analysis System
CardiovascularThe MC4000 Multi Channel Blood Pressure Analysis System is a non-invasive instrument designed to help researchers efficiently and effectively obtain

Coulbourn Habitest System
BehaviorHABITEST is designed to make it possible to implement most behavioral test protocols in a single system of modular test

Chatillon Force Measurement
SkeletomuscularThe Chatillon Grip Strength allows investigators to test the maximum force of a mouse’s grip which will be stored on

Abaxis VetScan VS2 Chemistry Analyzer
ChemicalAbaxis VetScan VS2 Chemistry Analyzer is a state-of-the-art chemistry, electrolyte, immunoassay and blood gas analyzer that delivers uncompromising accuracy from

Abaxis VetScan HM5 Hematology System
ChemicalThe Abaxis VetScan HM5 Color Hematology System is a fully-automated, five-part differential hematology analyzer displaying a comprehensive 22-parameter complete blood

epMotion 5075 Fluidi Handling Robot (Eppendorf)
SequencingEasy to program liquid handling robot that can be used for any molecular application that can be automated including NGS

Bio-Plex 200 (Bio-Rad)
Molecular BiologyA suspension array system that supports analysis of protein and nucleic acids in a multiplex solution detecting up to 100

Open Source Software
Open Source SoftwareThe TIGSS High Performance Computing cluster hosts a broad range of tools such as BWA, ABySS, SOAPdenovo, Velvet, TopHat, Cufflinks,
